Data Help Desk at AMS 2021
JANUARY 11-15, ONLINE
The Data Help Desk at AMS2021 (hosted by the AMS Board on Data Stewardship with additional support from ESIP) will connect researchers with data experts to enhance research and make data and software more open and FAIR. Follow the action on Twitter.
More Details
Do you have data-related questions? Are you looking to make your data and/or software open and FAIR to meet publisher or funder expectations, and get credit for your work? Are you interested in tools and resources for working with your data or for finding data to reuse? The Data Help Desk is here for you!
Data Experts
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Free
Data Help Desks Held
How to Participate
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- Follow the action on Twitter HERE.
- Ask Data Questions:
- Share your questions any time from January 11th-15th, 2021 via Twitter using the hashtag #DataHelpDesk or using the form found at
http://sgiz.mobi/s3/Data-Help-Desk-Questions. Our team of Earth science data professionals has decades of experience in informatics and in many
scientific domains and specializes in topics like finding, sharing,
analyzing, publishing, and citing data. - Ask questions at the virtual AMS Data Help Desk exhibit booth between
11:30 and 12:30 EST daily.
- Share your questions any time from January 11th-15th, 2021 via Twitter using the hashtag #DataHelpDesk or using the form found at
- Watch Tool Demos & Tutorials: Below is an ever-growing gallery of tools and resources you can use to manage your data and enhance your research. See something you like or have a question about one? Tell us on Twitter using #DataHelpDesk or at the virtual Data Help Desk Exhibit Booth, or use this form.
AMS2021 Data Help Desk Intro
Contributed Demos & Tutorials
Brief overview of the Research Data archive's data discovery, access, and metrics services. Contributor: UCAR Research Data Archive
Geoscience Community Analysis Toolkit (GEOCAT): Develop Python ecosystem packages for analysis & visualization of geosciences data. Contributor: GEOCAT
Learn how to use the NASAWorldview imagery mapping & visualization application to explore global Earth science data imagery. Contributor: NASA Earthdata
A new way to visualize Argo's biogeochemical data using Argovis. Contributor: Argovis
Overview of the DOE's online archive for earth and environmental data: Environmental System Science Data Infrastructure for a Virtual Ecosystem (ESS-DIVE). Contributor: ESS-DIVE
Overview of the resources and tools available on the NEON (National Ecological Observatory Network) website. Contributor: NEON.
Learn about the data repository and curation services offered by the Environmental Data Initiative (EDI). Contributor: EDI
Find tips for data management & sources for training on data management topics. Contributor: Nancy Hoebelheinrich (Knowledge Motifs LLC).
Learn about Practical Data Management, a module of the NCEAS Learning Hub. Contributor: NCEAS
Learn the critical components of effective data management plans (DMPs) and explore tools that can support you in writing DMPs. Contributor: DataONE
Learn how DataONE supports easy access and discovery of data across a network of Earth and environmental science data repositories. Contributor: DataONE
Overview of the Earth Observing Laboratory's Field Catalog: a suite of tools that provide support for documentation, planning, real-time imagery, and analysis for field projects around the globe. Contributor: NCAR Earth Observing Laboratory
PANGEO’s vision for Cloud Native Data Repositories. See also this related publication. Contributor: Ryan Abernathey of PANGEO
Learn more about PANGEO, a community platform for Big Data geoscience. Contributor: PANGEO
New Earth science data resources available to help users find, access, use, and visualize NASA Earth science data. Contributor: NASA Earthdata
What About Model Data? Determining Best Practices for Preservation and Replicability. Contributor: EarthCube Model Data RCN
Learn how to search for, find, and download data through ESS-DIVE, and follow along in the data upload and publication process. Contributor: ESS-DIVE
Open Altimetry is an exploration and visualization tool for data from the NASA ICESat and ICESat-2 satellites. Contributor: OpenAltimetry
ERDDAP is a data server that gives you a simple, consistent way to download subsets of gridded and tabular scientific datasets in common file formats and make graphs and maps. Learn more: here
Cloud-based data tools for research, collaboration, and workflow documentation in the aquatic sciences: JupyterHub and HydroShare. Contributor: CUAHSI
Repository & metadata aggregator lightning talks from Data Help Desk at ESA20. Contributors: Arctic Data Center, CUAHSI, DataONE, EDI, iDigBio, NEON, Neotoma
Learn about the Earth Observing Laboratory's Catalog Maps GIS-based tool. Contributor: NCAR Earth Observing Laboratory
Data Discovery Studio indexes over 1.6 million dataset descriptions from 40+ geoscience data repositories and community contributions. Contributor: Data Discovery Studio
Overview of ezEML, a form-based, do-it-yourself online application for the creation of metadata in the Ecological Metadata Language (EML). Contributor: Environmental Data Initiative (EDI)
Brief walk-through of the structure and organization of NEON’s Instrumented Systems data and how you can access it. Contributor: NEON
The Ag Data Commons is a public, government, scientific research data catalog and repository available to help the agricultural research community share and discover research data funded by the USDA. Contributor: USDA Ag Data Commons
Figshare for Institutions is a next generation, all in one, hosted repository designed for administrators and end users. Contributor: Figshare
HydroShare is repository for sharing, collaborating around, and formally publishing scientific data. Contributor: CUAHSI.
Learn how SGCI serves the science gateway community by sharing experiences & providing services. Contributor: SGCI
How ontologies can help you find and understand the data you need. Contributor: Arctic Data Center
Data Management Planning: A full overview of how to approach this, guidance for creating a DMP and a demo of the DMPTool. Contributor: DataONE
Peer-Reviewed Notebooks from the EarthCube Community
- An Interactive GUI for BALTO in a Jupyter notebook (GitHub | Recorded Demo)
- Argovis API exposed in a Python Jupyter notebook: an easy access to Argo profiles, weather events, and gridded products (GitHub)
- Semantic Annotation of Data using JSON Linked Data (GitHub)
- Processing digital elevation data for deep learning models using Keras Spatial (GitHub)
- Vertical Regridding and Remapping (GitHub)
- Scikit-downscale: an open source Python package for scalable climate downscaling (GitHub | Recorded Demo)
- 3D volume rendering of geophysical data using the yt platform (GitHub | Recorded Demo)
- Big Arrays, Fast: Profiling Cloud Storage Read Throughput (GitHub)
- CMIP6 without the interpolation: Grid-native analysis with Pangeo in the cloud (GitHub | Recorded Demo)
- Intake / Pangeo Catalog: Making It Easier To Consume Earth’s Climate and Weather Data Multi-Cloud workflows with Pangeo and Dask Gateway (GitHub | Recorded Demo)
- Jupyter Notebooks, the PmagPy Software Package and the Magnetics Information Consortium (MagIC) Database (GitHub | Recorded Demo)
- Jupyter Meets the Earth Community Forum (Full-length recording | Summary)
One-Pagers
One pager describing the NCAR maintained, python based Geoscience Community Analysis Toolkit. Contributor: GeoCAT
Overview of products and services maintained by the National Centers for Environmental Information (NCEI). Contributor: NCEI
QGreenland is a a free GIS package for Greenland: A free mapping tool to support interdisciplinary Greenland-focused research, teaching, decision making, and collaboration. Contributor: QGreenland
Learn about the data repository and curation services offered by the Environmental Data Initiative (EDI). Contributor: EDI
Institutional Data Repositories: An Important Option for Complying with Data Sharing Requirements. Contributor: University of Michigan Library
Science gateways allow science & engineering communities to access shared resources. Learn how SGCI serves the science gateway community by sharing experiences & providing services. Contributor: SGCI
Marine Geoscience Data System (MGDS) is a community-trusted data repository for marine geophysical data products and complementary data related to understanding the formation and evolution of the seafloor and sub-seafloor. Contributor: MGDS
OpenAltimetry is a cyberinfrastructure platform for discovery, access, and visualization of data from NASA's ICESat and ICESat-2 missions. Contributor: OpenAltimetry
Learn how NCEAS conducts transformational science focused on informing solutions that will allow people and nature to thrive. Contributor: NCEAS
The OpenTopography Community Dataspace allows those who are producing small to
moderate sized topographic datasets to archive, sharing, and properly cite their data. Contributor: OpenTopography
Learn basics & tips for use of R, RStudio, and Jupyter Notebooks. Contributor: Shweta Narkar, PhD Student at RPI.
This brochure outlines the services offered by NCAR's Earth Observing Laboratory (EOL) Data Management & Services Facility, include Data Planning, Field Support, Field Catalog Integrated Data Displays, and Data Archival, etc. Contributor: EOL
Overview of products and services maintained by the National Centers for Environmental Prediction (NCEP). Contributor: NCEP
Overview of the National Centers for Environmental Information (NCEI) Data Stewardship Services. Contributor: NCEI.
The Registry of Open Data on AWS exists to help people discover and share datasets that are available via AWS resources. Contributor: Open Data at AWS
Bringing global oceanic lithology and microfossil data collected by the ocean drilling programs to a single, searchable platform. Contributor: eODP (Extending Ocean Drilling Pursuits)
Learn about the data holdings of CCHDO, a public repository for high-quality repeat CTD and bottle data from GO-SHIP and other programs. Contributor: CCHDO
The Arctic Data Center (ADC) helps the research community reproducibly preserve and discover all products of NSF-funded science in the Arctic, including data, metadata, software, and documents. Contributor: ADC
Find learning resources on topics related to research data skills and data management. Contributor: Data Management Training Clearinghouse
Overview of the data management expectations to publish an article in an AMS publication.
Unidata provides data, software tools, and support to enhance Earth System education and research. Contributor: Unidata
A list of data resources provided by the National Center for Environmental Information (NCEI) for the 2021 AMS Data Help Desk. Contributor: NCEI
Geoweaver is a web system for composing & executing full-stack deep learning workflows by taking advantage of online spatial data facilities, high-performance computation platforms, and open-source deep learning libraries. Contributor: Geoweaver
Data Discovery Studio indexes over 1.6 million dataset descriptions from 40+ geoscience data repositories and community contributions. Contributor: Data Discovery Studio
Learn about the US Antarctic Program Data Center (USAP-DC). Contributor: USAP-DC
Brief presentation on how PIDs can help researchers make their data FAIR and themselves better know. Contributor: Knowledge Motifs.
A brief overview of the EarthCube Research Coordination Network (RCN) project, “What about model data?” Determining Best Practices for Preservation and Replicability. Contributor: What About Model Data RCN
DataONE is a community driven program providing access to data across multiple member repositories, supporting enhanced search and discovery of Earth and environmental data. Contributor: DataONE
Figshare is an all-in-one, hosted repository that helps researchers and institutions make research outputs findable and citable. Contributor: Figshare
The USGS Community for Data Integration (CDI) grows the knowledge base in data integration and management in the Earth sciences. Contributor: CDI
The TDS Jupyter Notebook service helps users discover, access, and visualize THREDDS datasets with Python. Contributor: Unidata
Relevant Publications & Other Resources
- Briney KA, Coates H, Goben A (2020) Foundational Practices of Research Data Management. Research Ideas and Outcomes 6: e56508. https://doi.org/10.3897/rio.6.e56508.
- Ryan Abernathey, Tom Augspurger, Anderson Banihirwe, et al. Cloud-Native Repositories for Big Scientific Data. Authorea. November 03, 2020. https://doi.org/10.22541/au.160443768.88917719/v1.
- NCAR GIS Tutorials
THANKS TO OUR CONTRIBUTORS
